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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015851993.1_cds_XP_016511667.1_24385
CDS Infomation

[gene=LOC107828806] [db_xref=GeneID:107828806] [protein=protein NSP-INTERACTING KINASE 3-like] [frame=3] [partial=5'] [protein_id=XP_016511667.1] [location=complement(join(2679..3160,3723..4595,4677..>4937))] [gbkey=CDS]
Sequence

TTGCAACTATGCTATAACCAGTTCAGTGGTAGCATACCAACTCAACTAGGGACTCTAAAG
AAGCTCAATGTCCTCGCTCTGCAATCCAATCAGTTAACTGGCGCGATCCCCGCTAGCTTG
GGGGAGTTAGGAGTGTTGATGAGGGTGGACTTGAGTTCTAATCATCTTTTTGGTTCAATT
CCTACAAAACTCGCAGATGCTCCCCTTCTTGAAGTCTTGGATATCCGAAGCAACAAGCTT
TCGGGCAATGTGCCTCTTGCTTTGAAGAGATTAGTTGGTGGATTCCAGTATGAGAACAAT
CCAGGACTATGCGGAGTAGGTTTCCCATCCTTAAGAGTTTGTACATCTTTGGATCGCTCG
AATCCTAATAGACCAGAACCCTATGGAGGTGGCTCGAGTGGTTTATCAACTAGAGATATT
CCAGAGACAGCTAATCTCAATCTAAATTGCAGTGGAAATGGCTGCGCAAAGTCATCGAAA
ACCTCACAGGCATCTGTTGTTGTAGGGGTTATTGTGGTTACTGTTATTGCATCTGCTATA
GGAGTTCTTACTTTCACTCACTATAGAAGACGAAAGCAGAAACTTGGAGGTGGACTGGAT
ATGTGTGATAGCCGTCTCAGTACTGACCAAACCAAGGAGGTTAATAGGAAGAACGGTTCT
CCACTAGTTAGTCTTGAGTACTCGAGTGGTTGGGATCCCTTGGCTGAGGGTCGGCGTTAT
GGTGGTGTATCCCAAGAGGTTTTGCAGAGCTACAGATTCAATTTGGAAGAGGTGGAGTCA
GCTACACAGTACTTTGCTGATAAGAATCGATTGGCTAAGAGCAGCTTTTCGACTACATAT
AGAGGGACTCTAAGAGATGGATCACTTATTGCTGTTACGAGAATTACGAAAATTAGCTGC
AAGTCAGAGGAAGCCGAGTTTTTAAGAGGACTAAACATCTTGACGTCTCTGAGACATGAA
AATTTAGTTAGGCTGAGAGGTTTCTGCTGCTCTAAAAGCAGGGGAGAATGTTTTCTCGTT
TATGATTTTGTTCCAAGAGGTAACTTGTTGCATTACCTAGACGTGAAGGAGGACGAAGCT
CGTGCTCTTGAATGGTCCACCAGGGTATCTATCATAAGTGGAACTGCAAAAGGGCTCGAG
TATTTGCACGGGGGTAAGGTGAATAAGCCAGCTCTAGTGCATCAAAATATCTGTGCCGAG
AACGTGCTCCTTGACCAGCGATTCAAACCATTGCTTTCAAACTCAGGCCTGCATAAGCTT
CTCACAAATGATATCGTCTTCTCAGCACTCAAGGCCAGTGCTGCCATGGGATATTTAGCT
CCAGAGTACTCTACTACAGGCCGATTTACGGAGAGGAGTGATATTTATGCCTTTGGAGTA
CTAATTTTTCAGATTCTCTCTGGCAAGCGAAAATTCACCAGTTCAATGCGTGCTGCTGCT
GAGTCGTGCAAACTCCATGACTTGATGGACGCGAATCTCCGTGGAAGGTTCTCTGAGTCT
GAGGCTGCAAAACTAGCAAAAATAGCTTTGTTATGTACACATGAATGTCCAGAGGAGAGA
CCAACCATGGAAACAATCGTACGAGAACTTGGTAATTTAGCTATCTTTTCCTAA

Peptide Sequence

PEP ID

XP_016511667.1
PEP Infomation

PREDICTED: protein NSP-INTERACTING KINASE 3-like, partial [Nicotiana tabacum]
Sequence

LQLCYNQFSGSIPTQLGTLKKLNVLALQSNQLTGAIPASLGELGVLMRVDLSSNHLFGSI
PTKLADAPLLEVLDIRSNKLSGNVPLALKRLVGGFQYENNPGLCGVGFPSLRVCTSLDRS
NPNRPEPYGGGSSGLSTRDIPETANLNLNCSGNGCAKSSKTSQASVVVGVIVVTVIASAI
GVLTFTHYRRRKQKLGGGLDMCDSRLSTDQTKEVNRKNGSPLVSLEYSSGWDPLAEGRRY
GGVSQEVLQSYRFNLEEVESATQYFADKNRLAKSSFSTTYRGTLRDGSLIAVTRITKISC
KSEEAEFLRGLNILTSLRHENLVRLRGFCCSKSRGECFLVYDFVPRGNLLHYLDVKEDEA
RALEWSTRVSIISGTAKGLEYLHGGKVNKPALVHQNICAENVLLDQRFKPLLSNSGLHKL
LTNDIVFSALKASAAMGYLAPEYSTTGRFTERSDIYAFGVLIFQILSGKRKFTSSMRAAA
ESCKLHDLMDANLRGRFSESEAAKLAKIALLCTHECPEERPTMETIVRELGNLAIFS

Transcript Sequence

Gene sequence data has not been registered.